sample	chr	startpos	endpos	nMajor	nMinor
TCGA-VQ-A8P3	1	61735	13989189	1	1
TCGA-VQ-A8P3	1	13991081	14238174	1	0
TCGA-VQ-A8P3	1	14238206	14496420	1	1
TCGA-VQ-A8P3	1	14496694	14676317	2	1
TCGA-VQ-A8P3	1	14679867	21709367	1	1
TCGA-VQ-A8P3	1	21709532	22044911	1	0
TCGA-VQ-A8P3	1	22047131	31445124	1	1
TCGA-VQ-A8P3	1	31446170	31706245	1	0
TCGA-VQ-A8P3	1	31707022	94747106	1	1
TCGA-VQ-A8P3	1	94747883	94800815	1	0
TCGA-VQ-A8P3	1	94800877	177960805	1	1
TCGA-VQ-A8P3	1	177961507	178010673	1	0
TCGA-VQ-A8P3	1	178010976	178242986	0	0
TCGA-VQ-A8P3	1	178255936	204240497	1	1
TCGA-VQ-A8P3	1	204240863	204380946	0	0
TCGA-VQ-A8P3	1	204383887	233012793	1	1
TCGA-VQ-A8P3	1	233014524	233357954	1	0
TCGA-VQ-A8P3	1	233359619	245735320	1	1
TCGA-VQ-A8P3	1	245735811	245876813	1	0
TCGA-VQ-A8P3	1	245877766	246193000	1	1
TCGA-VQ-A8P3	1	246195006	246607890	1	0
TCGA-VQ-A8P3	1	246608717	248930189	1	1
TCGA-VQ-A8P3	2	12784	41475471	1	1
TCGA-VQ-A8P3	2	41477010	42090943	1	0
TCGA-VQ-A8P3	2	42091824	42859839	1	1
TCGA-VQ-A8P3	2	42861164	43328666	2	1
TCGA-VQ-A8P3	2	43332337	79173020	1	1
TCGA-VQ-A8P3	2	79173521	79758479	1	0
TCGA-VQ-A8P3	2	79758872	159331078	1	1
TCGA-VQ-A8P3	2	159333060	159706394	1	0
TCGA-VQ-A8P3	2	159710719	168093989	1	1
TCGA-VQ-A8P3	2	168097995	168633602	1	0
TCGA-VQ-A8P3	2	168633863	177152037	1	1
TCGA-VQ-A8P3	2	177155652	177262004	3	1
TCGA-VQ-A8P3	2	177266968	186581945	1	1
TCGA-VQ-A8P3	2	186581981	186643815	0	0
TCGA-VQ-A8P3	2	186649879	211572648	1	1
TCGA-VQ-A8P3	2	211576871	211826667	1	0
TCGA-VQ-A8P3	2	211826980	216027723	1	1
TCGA-VQ-A8P3	2	216028031	216170477	1	0
TCGA-VQ-A8P3	2	216177775	240570295	1	1
TCGA-VQ-A8P3	2	240575835	240632384	0	0
TCGA-VQ-A8P3	2	240632441	241255168	1	1
TCGA-VQ-A8P3	2	241259024	241381611	0	0
TCGA-VQ-A8P3	2	241381668	242147305	1	1
TCGA-VQ-A8P3	3	18667	19883155	1	1
TCGA-VQ-A8P3	3	19887119	20439502	1	0
TCGA-VQ-A8P3	3	20446298	24979832	1	1
TCGA-VQ-A8P3	3	24982470	25067245	1	0
TCGA-VQ-A8P3	3	25067312	44983625	1	1
TCGA-VQ-A8P3	3	44984155	45127999	1	0
TCGA-VQ-A8P3	3	45128142	49915645	1	1
TCGA-VQ-A8P3	3	49919839	50040095	0	0
TCGA-VQ-A8P3	3	50043613	52713221	1	1
TCGA-VQ-A8P3	3	52715774	53011909	1	0
TCGA-VQ-A8P3	3	53019618	60025571	1	1
TCGA-VQ-A8P3	3	60026624	60082152	1	0
TCGA-VQ-A8P3	3	60086233	60278653	1	1
TCGA-VQ-A8P3	3	60278744	60492307	1	0
TCGA-VQ-A8P3	3	60493647	60612884	0	0
TCGA-VQ-A8P3	3	60618756	71219516	1	1
TCGA-VQ-A8P3	3	71219916	71358312	1	0
TCGA-VQ-A8P3	3	71358713	172678956	1	1
TCGA-VQ-A8P3	3	172685031	172772412	1	0
TCGA-VQ-A8P3	3	172772762	175215563	1	1
TCGA-VQ-A8P3	3	175215688	175648049	1	0
TCGA-VQ-A8P3	3	175650403	198169247	1	1
TCGA-VQ-A8P3	4	12281	2026835	1	1
TCGA-VQ-A8P3	4	2033870	3428785	1	0
TCGA-VQ-A8P3	4	3429468	7942467	1	1
TCGA-VQ-A8P3	4	7945837	8233177	1	0
TCGA-VQ-A8P3	4	8235208	150388942	1	1
TCGA-VQ-A8P3	4	150393980	150665111	1	0
TCGA-VQ-A8P3	4	150666902	190106768	1	1
TCGA-VQ-A8P3	5	15532	516206	1	1
TCGA-VQ-A8P3	5	516693	886872	0	0
TCGA-VQ-A8P3	5	896611	58970957	1	1
TCGA-VQ-A8P3	5	58970969	59302063	0	0
TCGA-VQ-A8P3	5	59313642	59402039	1	0
TCGA-VQ-A8P3	5	59402278	66665377	1	1
TCGA-VQ-A8P3	5	66665905	67141294	1	0
TCGA-VQ-A8P3	5	67146557	142308648	1	1
TCGA-VQ-A8P3	5	142309804	142483452	1	0
TCGA-VQ-A8P3	5	142484039	181363319	1	1
TCGA-VQ-A8P3	6	149661	1616908	1	1
TCGA-VQ-A8P3	6	1621169	2293314	0	0
TCGA-VQ-A8P3	6	2299019	5126921	1	1
TCGA-VQ-A8P3	6	5127513	5311663	1	0
TCGA-VQ-A8P3	6	5311847	5401397	1	1
TCGA-VQ-A8P3	6	5401837	5682986	1	0
TCGA-VQ-A8P3	6	5684123	20483539	1	1
TCGA-VQ-A8P3	6	20484374	20837345	1	0
TCGA-VQ-A8P3	6	20843920	26018984	1	1
TCGA-VQ-A8P3	6	26027192	26197818	0	0
TCGA-VQ-A8P3	6	26198221	26251373	1	0
TCGA-VQ-A8P3	6	26256298	35865191	1	1
TCGA-VQ-A8P3	6	35867261	36051559	1	0
TCGA-VQ-A8P3	6	36054851	148007740	1	1
TCGA-VQ-A8P3	6	148011922	148270005	1	0
TCGA-VQ-A8P3	6	148274722	148424115	0	0
TCGA-VQ-A8P3	6	148424853	170741917	1	1
TCGA-VQ-A8P3	7	43259	1886608	1	1
TCGA-VQ-A8P3	7	1889026	2374952	1	0
TCGA-VQ-A8P3	7	2375122	27610508	1	1
TCGA-VQ-A8P3	7	27615073	27742322	1	0
TCGA-VQ-A8P3	7	27747751	101873962	1	1
TCGA-VQ-A8P3	7	101877262	102030977	1	0
TCGA-VQ-A8P3	7	102038095	102229046	0	0
TCGA-VQ-A8P3	7	102230002	110742009	1	1
TCGA-VQ-A8P3	7	110742550	110988954	1	0
TCGA-VQ-A8P3	7	110991942	157678884	1	1
TCGA-VQ-A8P3	7	157679348	157791380	1	0
TCGA-VQ-A8P3	7	157802557	157960409	0	0
TCGA-VQ-A8P3	7	157961613	158399856	1	0
TCGA-VQ-A8P3	7	158403134	158638177	1	1
TCGA-VQ-A8P3	7	158638215	158952451	1	0
TCGA-VQ-A8P3	7	158952730	159334314	1	1
TCGA-VQ-A8P3	8	81254	47810659	1	1
TCGA-VQ-A8P3	8	47811240	49062782	1	0
TCGA-VQ-A8P3	8	49063187	140089278	1	1
TCGA-VQ-A8P3	8	140094580	140124496	0	0
TCGA-VQ-A8P3	8	140125556	140447102	1	0
TCGA-VQ-A8P3	8	140449585	145072769	1	1
TCGA-VQ-A8P3	9	46587	704859	1	1
TCGA-VQ-A8P3	9	705168	849537	3	1
TCGA-VQ-A8P3	9	849625	3665646	1	1
TCGA-VQ-A8P3	9	3667908	4099325	2	1
TCGA-VQ-A8P3	9	4099566	7167481	1	1
TCGA-VQ-A8P3	9	7167510	7267702	2	1
TCGA-VQ-A8P3	9	7268068	20590097	1	1
TCGA-VQ-A8P3	9	20590210	20880048	1	0
TCGA-VQ-A8P3	9	20881287	77162169	1	1
TCGA-VQ-A8P3	9	77162205	77321499	1	0
TCGA-VQ-A8P3	9	77322372	109335218	1	1
TCGA-VQ-A8P3	9	109335394	110149364	1	0
TCGA-VQ-A8P3	9	110156911	112214590	1	1
TCGA-VQ-A8P3	9	112218338	112912312	1	0
TCGA-VQ-A8P3	9	112913935	137632981	1	1
TCGA-VQ-A8P3	9	137633679	137770413	1	0
TCGA-VQ-A8P3	9	137772069	138200944	1	1
TCGA-VQ-A8P3	10	26823	396408	1	1
TCGA-VQ-A8P3	10	397134	645798	1	0
TCGA-VQ-A8P3	10	659495	809167	1	1
TCGA-VQ-A8P3	10	809323	1006308	1	0
TCGA-VQ-A8P3	10	1007010	72381252	1	1
TCGA-VQ-A8P3	10	72381281	72496272	1	0
TCGA-VQ-A8P3	10	72497361	72814048	0	0
TCGA-VQ-A8P3	10	72817840	75412303	1	1
TCGA-VQ-A8P3	10	75415176	75654902	0	0
TCGA-VQ-A8P3	10	75655127	75678541	1	0
TCGA-VQ-A8P3	10	75678612	76557477	1	1
TCGA-VQ-A8P3	10	76558814	76658160	2	1
TCGA-VQ-A8P3	10	76658462	133769379	1	1
TCGA-VQ-A8P3	11	198572	2458715	1	1
TCGA-VQ-A8P3	11	2459007	2831355	0	0
TCGA-VQ-A8P3	11	2836388	3657216	1	1
TCGA-VQ-A8P3	11	3657448	3917968	1	0
TCGA-VQ-A8P3	11	3919508	46547722	1	1
TCGA-VQ-A8P3	11	46549309	47031451	1	0
TCGA-VQ-A8P3	11	47040915	64093354	1	1
TCGA-VQ-A8P3	11	64093845	64205924	0	0
TCGA-VQ-A8P3	11	64216132	123100750	1	1
TCGA-VQ-A8P3	11	123105290	123160450	1	0
TCGA-VQ-A8P3	11	123161961	135074876	1	1
TCGA-VQ-A8P3	12	51460	2879864	1	1
TCGA-VQ-A8P3	12	2880176	3031456	1	0
TCGA-VQ-A8P3	12	3032329	12522920	1	1
TCGA-VQ-A8P3	12	12524679	12890185	1	0
TCGA-VQ-A8P3	12	12892789	50175007	1	1
TCGA-VQ-A8P3	12	50178516	50731358	1	0
TCGA-VQ-A8P3	12	50733955	123014268	1	1
TCGA-VQ-A8P3	12	123016762	123341986	1	0
TCGA-VQ-A8P3	12	123356026	124966959	1	1
TCGA-VQ-A8P3	12	124971959	125123876	1	0
TCGA-VQ-A8P3	12	125126334	133201603	1	1
TCGA-VQ-A8P3	13	18452809	49975945	1	1
TCGA-VQ-A8P3	13	49976328	50405519	1	0
TCGA-VQ-A8P3	13	50411049	72773953	1	1
TCGA-VQ-A8P3	13	72774791	72976205	1	0
TCGA-VQ-A8P3	13	72976671	114342922	1	1
TCGA-VQ-A8P3	14	18225647	34770759	1	1
TCGA-VQ-A8P3	14	34771049	35088775	1	0
TCGA-VQ-A8P3	14	35090273	66136560	1	1
TCGA-VQ-A8P3	14	66140837	67066556	1	0
TCGA-VQ-A8P3	14	67068715	106877229	1	1
TCGA-VQ-A8P3	15	19811075	58693190	1	1
TCGA-VQ-A8P3	15	58693653	58922017	1	0
TCGA-VQ-A8P3	15	58928195	59110948	0	0
TCGA-VQ-A8P3	15	59115052	60386151	1	1
TCGA-VQ-A8P3	15	60386513	60536359	1	0
TCGA-VQ-A8P3	15	60541625	64084809	1	1
TCGA-VQ-A8P3	15	64085682	64524233	1	0
TCGA-VQ-A8P3	15	64524888	67258332	1	1
TCGA-VQ-A8P3	15	67262997	67747928	1	0
TCGA-VQ-A8P3	15	67754677	85826734	1	1
TCGA-VQ-A8P3	15	85829314	101928837	3	1
TCGA-VQ-A8P3	16	10777	207273	1	1
TCGA-VQ-A8P3	16	209791	333753	0	0
TCGA-VQ-A8P3	16	335055	661905	1	0
TCGA-VQ-A8P3	16	664155	4331808	1	1
TCGA-VQ-A8P3	16	4339925	4837669	1	0
TCGA-VQ-A8P3	16	4839070	19393277	1	1
TCGA-VQ-A8P3	16	19393323	19685710	1	0
TCGA-VQ-A8P3	16	19686215	57598258	1	1
TCGA-VQ-A8P3	16	57598624	57660430	1	0
TCGA-VQ-A8P3	16	57661598	63586834	1	1
TCGA-VQ-A8P3	16	63588432	64198606	2	1
TCGA-VQ-A8P3	16	64199232	72209183	1	1
TCGA-VQ-A8P3	16	72209683	72624843	1	0
TCGA-VQ-A8P3	16	72633411	78575675	1	1
TCGA-VQ-A8P3	16	78580317	78831492	1	0
TCGA-VQ-A8P3	16	78831993	79047305	0	0
TCGA-VQ-A8P3	16	79047844	79189177	1	0
TCGA-VQ-A8P3	16	79189239	89325591	1	1
TCGA-VQ-A8P3	16	89327154	89541006	0	0
TCGA-VQ-A8P3	16	89546361	89762004	1	1
TCGA-VQ-A8P3	16	89762261	90221127	1	0
TCGA-VQ-A8P3	17	150733	2727428	1	1
TCGA-VQ-A8P3	17	2728691	2986575	1	0
TCGA-VQ-A8P3	17	2986897	7254724	1	1
TCGA-VQ-A8P3	17	7255179	7569566	1	0
TCGA-VQ-A8P3	17	7570139	13930411	1	1
TCGA-VQ-A8P3	17	13932052	14205608	1	0
TCGA-VQ-A8P3	17	14205732	57880603	1	1
TCGA-VQ-A8P3	17	57882583	58063809	1	0
TCGA-VQ-A8P3	17	58065050	81546926	1	1
TCGA-VQ-A8P3	17	81564500	82221127	1	0
TCGA-VQ-A8P3	17	82244836	82691356	1	1
TCGA-VQ-A8P3	17	82695004	82955792	1	0
TCGA-VQ-A8P3	17	82959140	83090856	1	1
TCGA-VQ-A8P3	18	48133	80257174	1	1
TCGA-VQ-A8P3	19	90910	18202705	1	1
TCGA-VQ-A8P3	19	18211331	18364920	1	0
TCGA-VQ-A8P3	19	18365058	58586487	1	1
TCGA-VQ-A8P3	20	80664	14775377	1	1
TCGA-VQ-A8P3	20	14775520	15455357	0	0
TCGA-VQ-A8P3	20	15462801	15501152	1	0
TCGA-VQ-A8P3	20	15501321	64324800	1	1
TCGA-VQ-A8P3	21	10336543	25898718	1	1
TCGA-VQ-A8P3	21	25899847	26130125	1	0
TCGA-VQ-A8P3	21	26130151	34796652	1	1
TCGA-VQ-A8P3	21	34799277	35043591	1	0
TCGA-VQ-A8P3	21	35048091	35831556	1	1
TCGA-VQ-A8P3	21	35838600	36165665	1	0
TCGA-VQ-A8P3	21	36166146	36261009	0	0
TCGA-VQ-A8P3	21	36261525	46677045	1	1
TCGA-VQ-A8P3	22	15294545	28761499	1	1
TCGA-VQ-A8P3	22	28764449	29033967	0	0
TCGA-VQ-A8P3	22	29034009	46393383	1	1
TCGA-VQ-A8P3	22	46393945	46614718	0	0
TCGA-VQ-A8P3	22	46626862	46817824	1	0
TCGA-VQ-A8P3	22	46818899	46868113	0	0
TCGA-VQ-A8P3	22	46868873	47047857	1	0
TCGA-VQ-A8P3	22	47048284	50796027	1	1
TCGA-VQ-A8P3	X	251810	7051071	1	0
TCGA-VQ-A8P3	X	7051963	7262690	0	0
TCGA-VQ-A8P3	X	7264451	10582185	1	0
TCGA-VQ-A8P3	X	10589808	10706833	0	0
TCGA-VQ-A8P3	X	10706840	57367669	1	0
TCGA-VQ-A8P3	X	57367995	57464507	0	0
TCGA-VQ-A8P3	X	57474238	97127531	1	0
TCGA-VQ-A8P3	X	97128744	97496483	0	0
TCGA-VQ-A8P3	X	97497516	155699444	1	0
TCGA-VQ-A8P3	X	155699647	156004181	2	1
