sample	chr	startpos	endpos	nMajor	nMinor
TCGA-VQ-A91S	1	61735	6946484	3	1
TCGA-VQ-A91S	1	6946638	8975955	2	1
TCGA-VQ-A91S	1	8976555	41374678	1	1
TCGA-VQ-A91S	1	41378551	41972749	1	0
TCGA-VQ-A91S	1	41973739	52422281	1	1
TCGA-VQ-A91S	1	52424219	53024009	2	1
TCGA-VQ-A91S	1	53024025	61609516	1	1
TCGA-VQ-A91S	1	61609847	62531167	2	1
TCGA-VQ-A91S	1	62531275	119140949	1	1
TCGA-VQ-A91S	1	119142221	121741181	2	1
TCGA-VQ-A91S	1	143285278	150028207	1	1
TCGA-VQ-A91S	1	150029763	178657857	2	1
TCGA-VQ-A91S	1	178659876	179548005	2	2
TCGA-VQ-A91S	1	179548231	180803572	2	1
TCGA-VQ-A91S	1	180804831	181831223	1	1
TCGA-VQ-A91S	1	181831471	221667645	2	1
TCGA-VQ-A91S	1	221668667	222144081	1	1
TCGA-VQ-A91S	1	222151513	248930189	2	1
TCGA-VQ-A91S	2	12784	24668842	1	1
TCGA-VQ-A91S	2	24670190	32091032	2	1
TCGA-VQ-A91S	2	32097236	32766328	1	0
TCGA-VQ-A91S	2	32769274	59803399	1	1
TCGA-VQ-A91S	2	59803445	60637137	1	0
TCGA-VQ-A91S	2	60639872	101080187	1	1
TCGA-VQ-A91S	2	101081682	101781784	2	1
TCGA-VQ-A91S	2	101783870	165121055	1	1
TCGA-VQ-A91S	2	165123803	167358412	2	1
TCGA-VQ-A91S	2	167360220	233741958	2	0
TCGA-VQ-A91S	2	233742043	242147305	1	0
TCGA-VQ-A91S	3	18667	10277856	1	1
TCGA-VQ-A91S	3	10278161	11014600	1	0
TCGA-VQ-A91S	3	11015145	58563920	1	1
TCGA-VQ-A91S	3	58564518	60242155	1	0
TCGA-VQ-A91S	3	60249360	60421077	0	0
TCGA-VQ-A91S	3	60422614	60726630	1	0
TCGA-VQ-A91S	3	60728790	170142451	1	1
TCGA-VQ-A91S	3	170143570	189142627	2	1
TCGA-VQ-A91S	3	189142988	189221752	1	1
TCGA-VQ-A91S	3	189222417	198169247	2	1
TCGA-VQ-A91S	4	12281	9995436	2	0
TCGA-VQ-A91S	4	9995488	10355824	1	0
TCGA-VQ-A91S	4	10357340	145823105	2	0
TCGA-VQ-A91S	4	145823903	147543447	1	0
TCGA-VQ-A91S	4	147544037	151223053	2	0
TCGA-VQ-A91S	4	151223642	151461836	3	0
TCGA-VQ-A91S	4	151462434	174313428	2	0
TCGA-VQ-A91S	4	174323717	190106768	1	0
TCGA-VQ-A91S	5	15532	16605232	1	1
TCGA-VQ-A91S	5	16606686	17398137	2	1
TCGA-VQ-A91S	5	17398619	56604369	1	1
TCGA-VQ-A91S	5	56606118	62560278	2	1
TCGA-VQ-A91S	5	62560329	141874794	2	0
TCGA-VQ-A91S	5	141883100	142560482	3	0
TCGA-VQ-A91S	5	142560487	144238551	1	0
TCGA-VQ-A91S	5	144239276	156008318	2	0
TCGA-VQ-A91S	5	156010793	157196674	2	1
TCGA-VQ-A91S	5	157196893	161426200	2	0
TCGA-VQ-A91S	5	161431952	178836884	1	0
TCGA-VQ-A91S	5	178840998	179419645	2	0
TCGA-VQ-A91S	5	179420603	181363319	1	0
TCGA-VQ-A91S	6	149661	17067587	2	0
TCGA-VQ-A91S	6	17069914	18401332	3	0
TCGA-VQ-A91S	6	18401377	40324489	2	0
TCGA-VQ-A91S	6	40324728	64665766	2	1
TCGA-VQ-A91S	6	64665786	69649846	2	2
TCGA-VQ-A91S	6	69649864	78033572	2	1
TCGA-VQ-A91S	6	78035116	81605725	2	2
TCGA-VQ-A91S	6	81606460	115136252	2	1
TCGA-VQ-A91S	6	115136731	118683828	1	1
TCGA-VQ-A91S	6	118684063	147539642	2	1
TCGA-VQ-A91S	6	147546177	147718536	2	0
TCGA-VQ-A91S	6	147719477	168547276	2	1
TCGA-VQ-A91S	6	168550949	170741917	1	0
TCGA-VQ-A91S	7	43259	1132882	1	0
TCGA-VQ-A91S	7	1132952	7309864	2	0
TCGA-VQ-A91S	7	7310030	9390808	1	0
TCGA-VQ-A91S	7	9391118	16983359	2	0
TCGA-VQ-A91S	7	16992354	35609463	1	0
TCGA-VQ-A91S	7	35610032	49667835	2	0
TCGA-VQ-A91S	7	49667917	50732437	1	0
TCGA-VQ-A91S	7	50733633	55650140	2	0
TCGA-VQ-A91S	7	55650249	69573665	3	0
TCGA-VQ-A91S	7	69575736	85393035	2	0
TCGA-VQ-A91S	7	85394016	97048354	3	0
TCGA-VQ-A91S	7	97051990	102116281	4	0
TCGA-VQ-A91S	7	102116315	110230420	3	0
TCGA-VQ-A91S	7	110235672	110557355	0	0
TCGA-VQ-A91S	7	110564380	137997928	3	0
TCGA-VQ-A91S	7	137998139	138806130	4	0
TCGA-VQ-A91S	7	138806648	149187880	3	0
TCGA-VQ-A91S	7	149189861	156515994	2	0
TCGA-VQ-A91S	7	156516992	157434976	4	0
TCGA-VQ-A91S	7	157437542	158418814	3	0
TCGA-VQ-A91S	7	158419100	159334314	3	1
TCGA-VQ-A91S	8	81254	347118	1	0
TCGA-VQ-A91S	8	347692	14180075	1	1
TCGA-VQ-A91S	8	14180157	17014367	1	0
TCGA-VQ-A91S	8	17015837	40936014	1	1
TCGA-VQ-A91S	8	40938810	77767246	3	1
TCGA-VQ-A91S	8	77768069	85545833	4	1
TCGA-VQ-A91S	8	85551400	87064660	1	1
TCGA-VQ-A91S	8	87076129	95154148	4	1
TCGA-VQ-A91S	8	95154556	95478976	3	1
TCGA-VQ-A91S	8	95479197	119683443	4	1
TCGA-VQ-A91S	8	119684837	127489534	5	1
TCGA-VQ-A91S	8	127489800	139579986	4	3
TCGA-VQ-A91S	8	139582115	145072769	4	2
TCGA-VQ-A91S	9	46587	694826	3	2
TCGA-VQ-A91S	9	699065	9544525	6	2
TCGA-VQ-A91S	9	9551773	9707109	3	1
TCGA-VQ-A91S	9	9711331	10236440	7	2
TCGA-VQ-A91S	9	10236629	16121271	3	2
TCGA-VQ-A91S	9	16121619	16366498	2	2
TCGA-VQ-A91S	9	16366743	17187046	3	2
TCGA-VQ-A91S	9	17193666	18022348	2	0
TCGA-VQ-A91S	9	18022604	71593185	2	1
TCGA-VQ-A91S	9	71593366	72635216	2	2
TCGA-VQ-A91S	9	72638813	85670683	2	1
TCGA-VQ-A91S	9	85671346	86633839	2	2
TCGA-VQ-A91S	9	86633839	87974587	2	1
TCGA-VQ-A91S	9	87974896	88699209	2	2
TCGA-VQ-A91S	9	88699233	98899560	2	1
TCGA-VQ-A91S	9	98900721	99861201	1	1
TCGA-VQ-A91S	9	99862214	127072835	2	1
TCGA-VQ-A91S	9	127073305	127412817	1	0
TCGA-VQ-A91S	9	127421270	128584517	2	1
TCGA-VQ-A91S	9	128590094	138200944	2	2
TCGA-VQ-A91S	10	26823	4678434	1	1
TCGA-VQ-A91S	10	4682011	4867261	2	1
TCGA-VQ-A91S	10	4874422	10983074	1	1
TCGA-VQ-A91S	10	10984326	11609797	1	0
TCGA-VQ-A91S	10	11609993	13423629	2	1
TCGA-VQ-A91S	10	13423979	28162062	1	1
TCGA-VQ-A91S	10	28162320	35600129	2	1
TCGA-VQ-A91S	10	35605833	49107035	1	1
TCGA-VQ-A91S	10	49109733	51236214	2	1
TCGA-VQ-A91S	10	51236454	51487147	1	0
TCGA-VQ-A91S	10	51487773	57912361	2	1
TCGA-VQ-A91S	10	57913954	120561767	1	1
TCGA-VQ-A91S	10	120561863	121855513	2	1
TCGA-VQ-A91S	10	121858771	122248058	3	1
TCGA-VQ-A91S	10	122249778	123079981	2	1
TCGA-VQ-A91S	10	123080297	124233340	1	1
TCGA-VQ-A91S	10	124233394	133769379	2	1
TCGA-VQ-A91S	11	198572	9155465	1	1
TCGA-VQ-A91S	11	9155536	34753511	2	1
TCGA-VQ-A91S	11	34753529	35565697	1	1
TCGA-VQ-A91S	11	35566440	86897409	2	1
TCGA-VQ-A91S	11	86899205	87268789	4	1
TCGA-VQ-A91S	11	87268904	113080938	2	1
TCGA-VQ-A91S	11	113080987	121546415	1	1
TCGA-VQ-A91S	11	121551260	128177274	1	0
TCGA-VQ-A91S	11	128177502	128914403	0	0
TCGA-VQ-A91S	11	128915228	135074876	1	0
TCGA-VQ-A91S	12	51460	31322366	1	1
TCGA-VQ-A91S	12	31330574	38110324	2	1
TCGA-VQ-A91S	12	38110727	51666219	1	1
TCGA-VQ-A91S	12	51668304	52842134	1	0
TCGA-VQ-A91S	12	52843809	105162438	1	1
TCGA-VQ-A91S	12	105163462	114508855	2	1
TCGA-VQ-A91S	12	114510016	114897831	3	2
TCGA-VQ-A91S	12	114902555	133201603	2	1
TCGA-VQ-A91S	13	18452809	74506371	2	1
TCGA-VQ-A91S	13	74508451	74838447	2	0
TCGA-VQ-A91S	13	74843053	92564269	2	1
TCGA-VQ-A91S	13	92568856	114342922	2	2
TCGA-VQ-A91S	14	18225647	98234352	2	0
TCGA-VQ-A91S	14	98236138	106877229	1	0
TCGA-VQ-A91S	15	19811075	78982349	2	0
TCGA-VQ-A91S	15	78982389	80542179	1	0
TCGA-VQ-A91S	15	80542303	99299042	2	0
TCGA-VQ-A91S	15	99299203	101928837	1	0
TCGA-VQ-A91S	16	10777	36048855	1	1
TCGA-VQ-A91S	16	46429870	62389752	1	0
TCGA-VQ-A91S	16	62389806	62797539	0	0
TCGA-VQ-A91S	16	62798114	69619793	1	0
TCGA-VQ-A91S	16	69619959	90221127	2	0
TCGA-VQ-A91S	17	150733	10803218	3	0
TCGA-VQ-A91S	17	10804891	27566462	2	0
TCGA-VQ-A91S	17	27570550	27904930	10	1
TCGA-VQ-A91S	17	27908024	29221855	2	0
TCGA-VQ-A91S	17	29225379	29395119	17	2
TCGA-VQ-A91S	17	29396247	39569245	2	0
TCGA-VQ-A91S	17	39570170	39805593	7	2
TCGA-VQ-A91S	17	39809616	40431982	2	0
TCGA-VQ-A91S	17	40434251	40454413	12	3
TCGA-VQ-A91S	17	40457926	41885423	18	2
TCGA-VQ-A91S	17	41891329	60107453	2	0
TCGA-VQ-A91S	17	60108275	75494761	3	0
TCGA-VQ-A91S	17	75501358	83090856	2	0
TCGA-VQ-A91S	18	48133	67669987	1	1
TCGA-VQ-A91S	18	67670253	80257174	1	0
TCGA-VQ-A91S	19	90910	5532624	1	1
TCGA-VQ-A91S	19	5532645	27836134	2	2
TCGA-VQ-A91S	19	27836164	32519982	2	1
TCGA-VQ-A91S	19	32520002	33171724	2	2
TCGA-VQ-A91S	19	33174864	44531052	2	1
TCGA-VQ-A91S	19	44531399	58586487	2	0
TCGA-VQ-A91S	20	80664	540039	3	3
TCGA-VQ-A91S	20	546836	8716075	2	1
TCGA-VQ-A91S	20	8716260	14487798	3	1
TCGA-VQ-A91S	20	14488093	14649267	3	0
TCGA-VQ-A91S	20	14652432	15467447	1	0
TCGA-VQ-A91S	20	15467918	15555362	1	1
TCGA-VQ-A91S	20	15555990	21811970	3	1
TCGA-VQ-A91S	20	21814547	26217263	2	1
TCGA-VQ-A91S	20	26217295	51613973	3	1
TCGA-VQ-A91S	20	51614634	52250676	4	2
TCGA-VQ-A91S	20	52252017	62284289	3	1
TCGA-VQ-A91S	20	62284325	64324800	2	1
TCGA-VQ-A91S	21	10336543	46677045	2	0
TCGA-VQ-A91S	22	15294545	20204808	1	1
TCGA-VQ-A91S	22	20208946	21574352	17	1
TCGA-VQ-A91S	22	21574627	31250881	1	1
TCGA-VQ-A91S	22	31251108	33249592	1	0
TCGA-VQ-A91S	22	33256766	33368113	0	0
TCGA-VQ-A91S	22	33370369	50796027	1	1
TCGA-VQ-A91S	X	251810	7283955	2	0
TCGA-VQ-A91S	X	7284432	7913119	1	0
TCGA-VQ-A91S	X	7914519	31200703	2	0
TCGA-VQ-A91S	X	31204391	31480683	1	0
TCGA-VQ-A91S	X	31492338	156004181	2	0
